PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.KDK03
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 553aa    MW: 61961 Da    PI: 5.4359
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.KDK03genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.15.4e-10477525348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      rW++ E++ l  +v+++G+g+Wk+I +      + R + ++k++w++++
      Aradu.KDK03 477 RWSPMEEDALRIGVEKFGSGNWKAILSFYSnifQDRKAIDLKDKWRNLM 525
                      9**********************************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.622470529IPR017930Myb domain
SuperFamilySSF466897.03E-15472527IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.6E-11472526IPR009057Homeodomain-like
SMARTSM007171.6E-7474527IPR001005SANT/Myb domain
CDDcd116602.58E-17476526No hitNo description
PfamPF002492.9E-7477524IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    Send to blast
MDPDISRWLA EFQLRSSAPD SVVADFLKSL NLSKPDNKLK KTLLLRILQS EITNASITEE  60
ALEVLEEIEA IDGNDAVPLL DFMRTAYCAI AVECTVKYLS ATSDGVPSKE YLAAMARIWF  120
GRVLKLEHSR SKLFSYELAQ WMENIEAAVV DTEIYQRLAK LNTRYDAFSA VRVYLQKVWE  180
TMGPCFLDTL AEMTFKGMKK ESASSVLLME GVGLNGGHEG KEQLEERAEG SVDGTQEPAK  240
GEKASQKGDP QLKRKLPAFL RCHRGVNKSI AEELGTEHSG SKNGTEFSAE VKVAEESLPE  300
ALNVSDAVGL KLAQKGTNQE GPMENMSVDV DVPNLNTSRA IVLFQPNNAD HEKKSSVHHS  360
RVQVQCPNLM EENNTAHESS NLMEQNSTAH EIPNLMEQNS TAHEIPNLME QNGTAHEIPN  420
LMEQNGTAHE IPNLMEQNST AHESPNSMEK NSTTRRYKRD NSKDNPTGVQ LRRKQRRWSP  480
MEEDALRIGV EKFGSGNWKA ILSFYSNIFQ DRKAIDLKDK WRNLMRTCSF AAAYPLEPSL  540
VVFTSILHFV PPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015951523.10.0PREDICTED: uncharacterized protein LOC107476251
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28243260
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58340.22e-20MYB_related family protein